Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015854128.1_cds_XP_016512467.1_25107
CDS Infomation

[gene=LOC107829529] [db_xref=GeneID:107829529] [protein=cytoplasmic tRNA 2-thiolation protein 2-like] [protein_id=XP_016512467.1] [location=complement(join(1583..1625,1994..2391,2774..2852,3035..3156,3922..4008,4093..4441,5512..5870))] [gbkey=CDS]
Sequence

ATGGCGTGCAACTCAGGAACCTGCCAGTCCGGTTGTTACAGAGACTCCTCTAATGAAGCA
GAAGAACATCCGCCAGTAAAAATTGCAAATGAAGCTCCAAACGACGTCGCTAACGGTAGA
AAGAGCACCGAACAATTATCTAACTTCGTCTGTGTTAAATGCAAGGTTAACAAAACCATA
GCCGCCGCTGCCTCCGCCGATGGCGGTGGTGACTTTATCGGAGGAGATAGAGGAAGGTTC
TGTGCAGATTGCTTCCGCAGTAATCTCTATGGAAAGTTCAGATTTGCTGTCACATCTAAT
GCTATGATTTCGCCGTCAGATAACGTCCTTGTCGCCTTCTCCGGCGGTACATGCTCCAGG
GTGGCTCTGCAGTTTACACATGAGATGCAAAGCAAATCTCAGAAGAACTTTGATGCCAGT
CCAGATAGAGCATTACCAGTTTTTGGTGTTGGGGTTGCTTTTATTGATGAAAAAGCCATT
TCTGCTGTCTCATCTGATGACTTTGATAGAGCTATTGAGAAGATGAAACTTATCGTGTCA
GATTTGGCTCCACCAGTGAAACAATTCCATGTAGTTCCAGCAGAGGCCATTTATTCGTTG
AAAGCTGGTGATGCAAAAGATAGACTGAATGAATTAATAAATTCTGTTAGTGATGTCACA
GGAAAAGAAGACCTGTTAGAGCATCTTCGCATGCTCTCCCTACAAAAGATAGCTCTTAAG
CATGGATATACCAAAGTTTTGCTAGGAACGTGTACATCAAGAATAGCTTGTCATGTACTT
GAAGCAACTGTCAAGGGTAGAGGTTACTCTTTAGCTGCTGATATCCAGTATGTTGATGCA
AGGTGGAAGATACCTGTGGTTCTTCCCCTCCGTGATTGTCTTATTCACGAGTTGAATACG
CTCTGCAGCCTTGACAGTTTGATGACTGTAGAAGTTTTTAACAGAGCACGTGCTGGTATC
AATGGCCTGGTCTCCTCATTTGTAAAATTGTTGCAGGAGGAAAACCCTTCCCGGGAAAGC
ACAATCATGAGAACAGCTGGAAAGCTAACACCTTTTCATTTCAATAGAATGTCAGAGGAC
AATAACTATAACGATCAGGTGGCATCTCAAAGGAGGCAAAAGAAATACAGCCTGAAAACT
AACGATGCCCTTCCTCCCGAGTTATTCTGTCCTATTTGCAGTAGTCCTCTAAAAATATCC
ACCTTCGGAACATCAATTAGTTTTGACAATGCGAAAACTAGTCTCAATGCGATTGGGGCT
GCATGCTGTGCAAGTTGTCAGTTTCAGGTTCTTCCCAAGGACCCCTCATCTCTGGAGCAC
TTCATTTCTCTCTTGCCACCATCAATGGTTTCCCAAGCAGAGGATGGTGATCATCTAAGT
CAGAGACAGCTAAGGGAGCAAATAGAAGACTGCTTGCTCTCGGACAACGAAGACTGA

Peptide Sequence

PEP ID

XP_016512467.1
PEP Infomation

PREDICTED: cytoplasmic tRNA 2-thiolation protein 2-like [Nicotiana tabacum]
Sequence

MACNSGTCQSGCYRDSSNEAEEHPPVKIANEAPNDVANGRKSTEQLSNFVCVKCKVNKTI
AAAASADGGGDFIGGDRGRFCADCFRSNLYGKFRFAVTSNAMISPSDNVLVAFSGGTCSR
VALQFTHEMQSKSQKNFDASPDRALPVFGVGVAFIDEKAISAVSSDDFDRAIEKMKLIVS
DLAPPVKQFHVVPAEAIYSLKAGDAKDRLNELINSVSDVTGKEDLLEHLRMLSLQKIALK
HGYTKVLLGTCTSRIACHVLEATVKGRGYSLAADIQYVDARWKIPVVLPLRDCLIHELNT
LCSLDSLMTVEVFNRARAGINGLVSSFVKLLQEENPSRESTIMRTAGKLTPFHFNRMSED
NNYNDQVASQRRQKKYSLKTNDALPPELFCPICSSPLKISTFGTSISFDNAKTSLNAIGA
ACCASCQFQVLPKDPSSLEHFISLLPPSMVSQAEDGDHLSQRQLREQIEDCLLSDNED

Transcript Sequence

Gene sequence data has not been registered.